GUS Schema >> DoTS::SignalPeptideFeature (subclass of DoTS::AAFeature )

This view of AAFeatureImp stores predicted and annotated signal peptides.

Light yellow rows indicate columns provided from the superclass.

column nulls? type description
AA_Feature_ID no NUMBER(10,0) Edit
AA_SEQUENCE_ID no DoTS::AASequence (NUMBER(10,0) ) Edit
Feature_NAME_ID DoTS::FeatureName (NUMBER(10,0) ) Edit
PARENT_ID DoTS::AAFeature (NUMBER(10,0) ) Edit
NA_Feature_ID DoTS::NAFeature (NUMBER(10,0) ) Edit
SUBCLASS_VIEW STRING(30) Edit
SEQUENCE_ONTOLOGY_ID SRes::SequenceOntology (NUMBER(10,0) ) Edit
DESCRIPTION STRING(4000) Edit
PFAM_ENTRY_ID DoTS::PfamEntry (NUMBER(10,0) ) Edit
MOTIF_AA_SEQUENCE_ID DoTS::AASequence (NUMBER(10,0) ) Edit
REPEAT_TYPE_ID DoTS::RepeatType (NUMBER(10,0) ) Edit
EXTERNAL_DATABASE_RELEASE_ID SRes::ExternalDatabaseRelease (NUMBER(10,0) ) Edit
SOURCE_ID STRING(50) Edit
PREDICTION_ALGORITHM_ID Core::Algorithm (NUMBER(5,0) ) Edit
IS_PREDICTED no NUMBER(1,0) Edit
REVIEW_STATUS_ID SRes::ReviewStatus (NUMBER(12,0) ) Edit
NAME STRING(255) Edit
ALGORITHM_NAME STRING(255) Edit
MAXY_SCORE FLOAT Edit
MAXY_CONCLUSION NUMBER(3,0) Edit
MAXC_SCORE FLOAT Edit
MAXC_CONCLUSION NUMBER(3,0) Edit
MAXS_SCORE FLOAT Edit
MAXS_CONCLUSION NUMBER(3,0) Edit
MEANS_SCORE FLOAT Edit
MEANS_CONCLUSION NUMBER(3,0) Edit
NUM_POSITIVES NUMBER(12,0) Edit
SIGNAL_PROBABILITY FLOAT Edit
ANCHOR_PROBABILITY FLOATprobability given by SignalP software Edit

Child tables:

Subclasses: